Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFV72031.1FIG00604211: hypothetical protein. (153 aa)    
Predicted Functional Partners:
SFV72028.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
     0.955
SFV72029.1
FIG00604604: hypothetical protein.
 
     0.955
SFV72032.1
Molybdenum cofactor biosynthesis protein MoaA.
 
     0.955
SFV72030.1
FIG00602866: hypothetical protein.
 
    0.953
SFV72034.1
CTP:molybdopterin cytidylyltransferase.
 
     0.937
SFV72033.1
Phenylacetate-coenzyme A ligase.
 
    0.917
SFV72027.1
Xanthine dehydrogenase iron-sulfur subunit / Xanthine dehydrogenase, molybdenum binding subunit.
 
     0.892
SFV72035.1
Alpha-ribazole-5'-phosphate phosphatase.
 
     0.857
SFV72256.1
Hypothetical protein.
  
     0.465
SFV73807.1
Cytochrome c family protein.
  
     0.441
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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