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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72076.1Hypothetical protein. (184 aa)    
Predicted Functional Partners:
SFV72074.1
Hypothetical protein.
     
 0.784
SFV72075.1
Virion morphogenesis protein.
       0.770
SFV72073.1
Hypothetical protein.
       0.758
SFV72078.1
Bacteriophage tail sheath protein.
  
  
 0.722
SFV72072.1
Hypothetical protein.
       0.716
SFV72071.1
Phage protein.
       0.715
SFV72077.1
Hypothetical protein.
       0.689
SFV72080.1
Phage tail tube protein.
       0.689
SFV72079.1
Hypothetical protein.
       0.666
SFV72081.1
Mu-like prophage FluMu protein gp41.
       0.597
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.