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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72105.1Esterase/lipase. (237 aa)    
Predicted Functional Partners:
SFV72134.1
FIG00602955: hypothetical protein.
  
     0.597
SFV72136.1
FIG00603395: hypothetical protein.
  
     0.574
SFV73629.1
Exoribonuclease II.
 
    0.552
SFV72748.1
TRASH.
  
     0.547
mtaD
S-adenosylhomocysteine deaminase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.
       0.536
SFV73768.1
FIG00602547: hypothetical protein.
  
     0.534
SFV74042.1
FIG00605754: hypothetical protein.
  
     0.520
SFV73496.1
Chorismate mutase I / EPT-like Enolpyruvate transferase (EPSP synthase-like).
  
     0.515
SFV72172.1
Hypothetical protein.
  
     0.475
SFV72476.1
FIG00602432: hypothetical protein.
  
     0.473
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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