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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72117.1Membrane protein, putative. (377 aa)    
Predicted Functional Partners:
SFV72118.1
Hypothetical protein.
 
   
 0.922
SFV74015.1
Membrane protein, putative.
  
     0.731
SFV74014.1
FIG00604693: hypothetical protein.
 
     0.724
SFV72119.1
Thiosulfate reductase precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.720
SFV73786.1
Membrane protein, putative.
  
     0.708
SFV73894.1
Methylated-DNA--protein-cysteine methyltransferase.
  
     0.683
SFV74016.1
FIG00607763: hypothetical protein.
  
     0.599
SFV71999.1
FIG00602705: hypothetical protein.
  
     0.570
SFV72120.1
Anaerobic dimethyl sulfoxide reductase chain B.
  
    0.569
SFV73323.1
Membrane protein, putative.
  
     0.568
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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