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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72134.1FIG00602955: hypothetical protein. (572 aa)    
Predicted Functional Partners:
SFV72136.1
FIG00603395: hypothetical protein.
 
     0.900
SFV72132.1
ATPase, AAA family.
 
     0.812
SFV72133.1
Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.789
SFV73496.1
Chorismate mutase I / EPT-like Enolpyruvate transferase (EPSP synthase-like).
  
     0.772
SFV72131.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.771
SFV72172.1
Hypothetical protein.
  
     0.771
SFV72476.1
FIG00602432: hypothetical protein.
  
     0.769
SFV72977.1
TPR repeat.
  
     0.768
SFV72943.1
FIG00602270: hypothetical protein.
  
     0.765
SFV73945.1
Lipoprotein, putative.
  
     0.763
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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