STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72143.1Transcriptional regulator-like protein. (314 aa)    
Predicted Functional Partners:
SFV74295.1
IncI1 plasmid conjugative transfer integral membrane protein TraY.
  
     0.621
SFV74281.1
IncP-type DNA relaxase TraI.
 
     0.604
SFV74286.1
IcmP (DotM) protein.
  
     0.598
SFV74304.1
IcmK (DotH) protein.
  
     0.566
SFV74293.1
DotC protein.
  
     0.544
SFV72631.1
Hypothetical protein.
  
     0.536
SFV72630.1
FIG00634587: hypothetical protein.
  
   
 0.498
SFV74300.1
IcmL (DotI) protein.
  
     0.494
SFV74303.1
IcmE (DotG) protein.
  
    0.477
glpF
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.465
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.