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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72332.1FIG00605752: hypothetical protein. (133 aa)    
Predicted Functional Partners:
SFV72334.1
Hypothetical protein.
  
    0.776
SFV72333.1
Hypothetical protein.
       0.773
SFV72335.1
Phage terminase, large subunit.
       0.766
SFV72336.1
Mu-like prophage FluMu protein gp29.
  
    0.629
SFV72337.1
Phage (Mu-like) virion morphogenesis protein.
       0.551
SFV72338.1
ADP-ribosylglycohydrolase.
       0.527
SFV72339.1
Phage protein.
  
    0.515
SFV72341.1
FIG00602534: hypothetical protein.
  
    0.464
SFV72330.1
Phage lysin #murein transglycosylase.
       0.439
SFV72331.1
Hypothetical protein.
       0.439
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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