STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72343.1Virion morphogenesis protein. (164 aa)    
Predicted Functional Partners:
SFV72339.1
Phage protein.
 
    0.871
SFV72337.1
Phage (Mu-like) virion morphogenesis protein.
 
  
 0.854
SFV72336.1
Mu-like prophage FluMu protein gp29.
 
    0.850
SFV72335.1
Phage terminase, large subunit.
 
     0.832
SFV71944.1
Phage (Mu-like) virion morphogenesis protein.
 
  
 0.790
SFV72069.1
Phage (Mu-like) virion morphogenesis protein.
 
  
 0.790
SFV71943.1
Mu-like prophage FluMu protein gp29.
 
    0.784
SFV72068.1
Mu-like prophage FluMu protein gp29.
 
    0.784
SFV71942.1
Phage terminase, large subunit.
 
     0.781
SFV72067.1
Phage terminase, large subunit.
 
     0.779
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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