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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72349.1Phage tape measure. (847 aa)    
Predicted Functional Partners:
SFV72347.1
FIG00604520: hypothetical protein.
 
     0.825
SFV72346.1
FIG00602320: hypothetical protein.
 
     0.820
SFV72354.1
Baseplate assembly protein, putative.
 
     0.817
SFV72351.1
FIG00603028: hypothetical protein.
  
    0.813
SFV72343.1
Virion morphogenesis protein.
 
    0.779
SFV72350.1
Hypothetical protein.
       0.779
SFV72337.1
Phage (Mu-like) virion morphogenesis protein.
 
     0.774
SFV72339.1
Phage protein.
 
     0.774
SFV72336.1
Mu-like prophage FluMu protein gp29.
 
    0.768
SFV72318.1
Bacteriophage transposase A protein, putative.
  
   
 0.762
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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