close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72357.1Virulence-associated protein. (1066 aa)    
Predicted Functional Partners:
SFV72354.1
Baseplate assembly protein, putative.
 
     0.807
SFV72356.1
Hypothetical protein.
       0.774
SFV72337.1
Phage (Mu-like) virion morphogenesis protein.
 
     0.769
SFV73733.1
Hypothetical protein.
  
     0.763
SFV74322.1
Hypothetical protein.
  
     0.763
SFV72358.1
Tail fiber assembly protein, putative.
       0.757
SFV72318.1
Bacteriophage transposase A protein, putative.
  
     0.735
SFV71945.1
Phage protein.
  
     0.712
SFV72339.1
Phage protein.
 
     0.707
SFV71927.1
Bacteriophage transposase A protein, putative.
  
     0.706
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.