STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72358.1Tail fiber assembly protein, putative. (534 aa)    
Predicted Functional Partners:
SFV72357.1
Virulence-associated protein.
       0.757
SFV72356.1
Hypothetical protein.
       0.741
SFV72354.1
Baseplate assembly protein, putative.
  
    0.633
SFV72355.1
Hypothetical protein.
       0.629
SFV72353.1
Baseplate assembly protein, putative.
       0.625
SFV72359.1
Hypothetical protein.
       0.559
SFV72659.1
Hypothetical protein.
  
  
0.489
SFV72082.1
ATP-dependent Clp protease proteolytic subunit.
  
  
 0.483
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.