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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72496.1HtrA protease/chaperone protein; Belongs to the peptidase S1C family. (480 aa)    
Predicted Functional Partners:
SFV74201.1
peptidase/PDZ domain protein.
  
  
 
0.917
SFV72495.1
SSU ribosomal protein S1p.
 
    0.790
SFV72782.1
Capsular polysaccharide biosynthesis fatty acid synthase WcbR.
  
 0.573
SFV72847.1
Multi-sensor hybrid histidine kinase.
  
 
 0.558
SFV73706.1
Multi-sensor hybrid histidine kinase.
  
  
 0.545
SFV74354.1
Sensor histidine kinase/response regulator.
  
  
 0.545
SFV73976.1
FIG00604257: hypothetical protein.
  
 0.544
SFV72497.1
Phosphoglucomutase.
       0.523
rplY
LSU ribosomal protein L25p; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
 
   0.503
SFV74193.1
2-acylglycerophosphoethanolamine acyltransferase.
  
 
 0.499
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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