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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnEPhosphonate ABC transporter permease protein phnE (TC 3.A.1.9.1). (265 aa)    
Predicted Functional Partners:
phnD
Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1).
 
 0.998
phnC
Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1); Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 
 0.992
SFV72509.1
PhnI protein.
 
  
 0.855
phnJ
PhnJ protein; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
  
 0.844
phnH
PhnH protein.
 
  
 0.844
phnK
Phosphonates transport ATP-binding protein PhnK.
 
  
 0.842
phnG
PhnG protein.
 
  
 0.826
SFV72512.1
Protein RcsF.
 
     0.818
phnL
Phosphonates transport ATP-binding protein PhnL.
 
  
 0.811
phnM
Metal-dependent hydrolase involved in phosphonate metabolism.
 
  
 0.763
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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