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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72528.12-hydroxyglutaryl-CoA dehydratase, D-component. (376 aa)    
Predicted Functional Partners:
SFV72529.1
Benzoyl-CoA reductase subunit BadG.
 
 0.975
SFV74402.1
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase.
 
 
 0.740
SFV72531.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
     0.733
yedF
Hypothetical protein Cj1505c.
 
    0.709
SFV72530.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
     0.701
SFV72532.1
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
     0.654
SFV72925.1
Selenium-dependent molybdenum hydroxylase system protein YqeB.
 
     0.501
SFV74256.1
Glycine reductase component B beta subunit / Glycine reductase component B alpha subunit.
  
     0.498
SFV74257.1
Glycine reductase component B gamma subunit @ selenocysteine-containing.
  
     0.492
grdA
Glycine/sarcosine/betaine reductase protein A @ selenocysteine-containing.
  
     0.489
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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