STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72532.1ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. (368 aa)    
Predicted Functional Partners:
SFV72531.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
 0.978
SFV72530.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
  
 0.973
SFV72528.1
2-hydroxyglutaryl-CoA dehydratase, D-component.
 
     0.654
SFV72529.1
Benzoyl-CoA reductase subunit BadG.
 
     0.584
SFV72847.1
Multi-sensor hybrid histidine kinase.
  
  
 0.515
SFV72241.1
Glutamate synthase [NADPH] large chain.
   
  
 0.489
nifU
Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.440
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.