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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72553.1Phosphoglycolate phosphatase. (221 aa)    
Predicted Functional Partners:
SFV72880.1
Phosphoglycolate phosphatase.
  
  
 
0.927
SFV73078.1
HAD-superfamily hydrolase, subfamily IA, variant 1.
  
  
 
0.916
SFV74105.1
Glycolate dehydrogenase, subunit GlcD.
    
 0.905
pdxB
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.901
SFV74106.1
Predicted glycolate dehydrogenase, 2-subunit type, iron-sulfur subunit GlcF.
     
  0.900
nrdG
Ribonucleotide reductase of class III (anaerobic), activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.
 
      0.673
SFV72554.1
Hypothetical NagD-like phosphatase.
  
  
 0.612
moaA
Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
    0.449
SFV72782.1
Capsular polysaccharide biosynthesis fatty acid synthase WcbR.
  
  
 0.442
nifJ
Pyruvate-flavodoxin oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
     
 0.430
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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