Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFV72569.1 | lolA | DESPIGER_0689 | DESPIGER_0688 | Cell division protein FtsK. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.825 |
| SFV72685.1 | SFV72686.1 | DESPIGER_0810 | DESPIGER_0811 | ABC transporter, ATP-binding protein. | ABC-type antimicrobial peptide transport system, permease component. | 0.975 |
| SFV72685.1 | SFV74340.1 | DESPIGER_0810 | DESPIGER_2523 | ABC transporter, ATP-binding protein. | Lipoprotein releasing system transmembrane protein LolE. | 0.802 |
| SFV72685.1 | lolA | DESPIGER_0810 | DESPIGER_0688 | ABC transporter, ATP-binding protein. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.656 |
| SFV72686.1 | SFV72685.1 | DESPIGER_0811 | DESPIGER_0810 | ABC-type antimicrobial peptide transport system, permease component. | ABC transporter, ATP-binding protein. | 0.975 |
| SFV72686.1 | SFV72712.1 | DESPIGER_0811 | DESPIGER_0840 | ABC-type antimicrobial peptide transport system, permease component. | FIG00603620: hypothetical protein. | 0.791 |
| SFV72686.1 | lolA | DESPIGER_0811 | DESPIGER_0688 | ABC-type antimicrobial peptide transport system, permease component. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.686 |
| SFV72686.1 | lolD | DESPIGER_0811 | DESPIGER_2522 | ABC-type antimicrobial peptide transport system, permease component. | Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. | 0.791 |
| SFV72712.1 | SFV72686.1 | DESPIGER_0840 | DESPIGER_0811 | FIG00603620: hypothetical protein. | ABC-type antimicrobial peptide transport system, permease component. | 0.791 |
| SFV72712.1 | SFV74340.1 | DESPIGER_0840 | DESPIGER_2523 | FIG00603620: hypothetical protein. | Lipoprotein releasing system transmembrane protein LolE. | 0.815 |
| SFV72712.1 | lolA | DESPIGER_0840 | DESPIGER_0688 | FIG00603620: hypothetical protein. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.725 |
| SFV73311.1 | SFV74122.1 | DESPIGER_1466 | DESPIGER_2300 | Putative Tol-Pal system beta propeller repeat protein TolB; tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins. | OmpA family protein. | 0.875 |
| SFV73311.1 | SFV74340.1 | DESPIGER_1466 | DESPIGER_2523 | Putative Tol-Pal system beta propeller repeat protein TolB; tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins. | Lipoprotein releasing system transmembrane protein LolE. | 0.599 |
| SFV73311.1 | lolA | DESPIGER_1466 | DESPIGER_0688 | Putative Tol-Pal system beta propeller repeat protein TolB; tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.631 |
| SFV73311.1 | yfiO | DESPIGER_1466 | DESPIGER_0693 | Putative Tol-Pal system beta propeller repeat protein TolB; tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins. | Putative lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.787 |
| SFV74122.1 | SFV73311.1 | DESPIGER_2300 | DESPIGER_1466 | OmpA family protein. | Putative Tol-Pal system beta propeller repeat protein TolB; tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins. | 0.875 |
| SFV74122.1 | SFV74340.1 | DESPIGER_2300 | DESPIGER_2523 | OmpA family protein. | Lipoprotein releasing system transmembrane protein LolE. | 0.627 |
| SFV74122.1 | lolA | DESPIGER_2300 | DESPIGER_0688 | OmpA family protein. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.610 |
| SFV74337.1 | SFV74340.1 | DESPIGER_2520 | DESPIGER_2523 | N-acetylmuramoyl-L-alanine amidase. | Lipoprotein releasing system transmembrane protein LolE. | 0.517 |
| SFV74337.1 | lolA | DESPIGER_2520 | DESPIGER_0688 | N-acetylmuramoyl-L-alanine amidase. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.670 |
page 1 of 3