close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72596.1Capsular polysaccharide export system periplasmic protein KpsD. (516 aa)    
Predicted Functional Partners:
SFV72787.1
Capsular polysaccharide export system inner membrane protein KpsE.
 
  
 0.928
SFV72785.1
Capsular polysaccharide ABC transporter, permease protein KpsM.
 
  
 0.909
SFV72786.1
Capsular polysaccharide ABC transporter, ATP-binding protein KpsT.
 
  
 0.780
SFV72595.1
Lipoprotein, putative.
       0.737
SFV72583.1
Cytosolic Fe-S cluster assembling factor NBP35; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.687
SFV72782.1
Capsular polysaccharide biosynthesis fatty acid synthase WcbR.
 
   
 0.659
SFV72594.1
Hypothetical protein.
       0.595
SFV72965.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.574
SFV72597.1
Hypothetical protein.
       0.533
SFV72204.1
O-antigen export system permease protein RfbD.
  
  
 0.513
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.