Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFV72601.1Succinate dehydrogenase flavoprotein subunit. (557 aa)    
Predicted Functional Partners:
SFV72697.1
Heterodisulfide reductase, cytochrome reductase subunit.
 
 0.917
nifJ
Pyruvate-flavodoxin oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 
 0.821
SFV72602.1
Formate dehydrogenase-O, major subunit.
 
  
 0.711
SFV74193.1
2-acylglycerophosphoethanolamine acyltransferase.
  
 
 0.701
SFV73618.1
Plasmid recombination, MobE mobilization protein.
  
 
 
 0.696
SFV72025.1
Hypothetical protein.
  
     0.687
SFV74309.1
Plasmid recombination enzyme.
  
 
 
 0.687
SFV72599.1
Di-and tricarboxylate transporters.
  
    0.662
SFV72454.1
Plasmid recombination, MobE mobilization protein.
  
 
 
 0.597
SFV72600.1
Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
    0.591
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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