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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72602.1Formate dehydrogenase-O, major subunit. (566 aa)    
Predicted Functional Partners:
SFV72241.1
Glutamate synthase [NADPH] large chain.
 
 0.999
SFV72618.1
Formate dehydrogenase O alpha subunit @ selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 0.944
SFV73502.1
Heterodisulfide reductase, subunit A/methylviologen reducing hydrogenase, subunit delta.
 
 
 0.941
SFV73128.1
Conserved hypothetical protein.
  
 
 0.916
pyrD
Dihydroorotate dehydrogenase, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.
 
 
 0.915
cooF
CO dehydrogenase iron-sulfur protein CooF.
   
 0.914
SFV72617.1
Formate dehydrogenase, beta subunit, putative.
    
 0.913
SFV73980.1
Iron-sulfur cluster-binding protein.
    
 0.913
SFV72614.1
Molybdopterin biosynthesis protein MoeA.
   
 
  0.901
SFV73533.1
Coenzyme F420-reducing hydrogenase, beta subunit.
  
 
 0.866
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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