Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFV72609.1Trk system potassium uptake protein TrkA. (580 aa)    
Predicted Functional Partners:
SFV73190.1
Potassium uptake protein, integral membrane component, KtrB.
  
 
 0.731
SFV72610.1
Hypothetical protein.
       0.618
SFV72755.1
Dinitrogenase iron-molybdenum cofactor protein.
  
     0.617
SFV73093.1
FIG00602705: hypothetical protein.
  
     0.609
SFV71999.1
FIG00602705: hypothetical protein.
  
     0.600
SFV73139.1
Molybdenum cofactor biosynthesis protein MoaE.
  
    0.600
fur
Peroxide stress regulator PerR, FUR family; Belongs to the Fur family.
 
  
 0.495
SFV73797.1
Predicted cobalt transporter in sulfate-reducing delta-proteobacteria.
  
     0.472
cobA
Uroporphyrinogen-III methyltransferase / Uroporphyrinogen-III synthase.
  
    0.461
SFV73041.1
FIG00605059: hypothetical protein.
  
     0.460
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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