STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72683.1Hypothetical protein. (361 aa)    
Predicted Functional Partners:
SFV72682.1
Putative virulence factor.
       0.789
SFV72684.1
PpkA.
       0.774
SFV72687.1
FIG00605096: hypothetical protein.
  
    0.754
SFV72685.1
ABC transporter, ATP-binding protein.
       0.748
SFV72686.1
ABC-type antimicrobial peptide transport system, permease component.
       0.748
SFV72680.1
FIG00606349: hypothetical protein.
       0.715
SFV72681.1
SrfB.
       0.715
SFV72679.1
FIG00605072: hypothetical protein.
   
 
 0.714
SFV72678.1
FIG00606814: hypothetical protein.
  
  
 0.555
SFV72688.1
2-hydroxy-3-oxopropionate reductase.
       0.550
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.