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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72698.1NAD-dependent formate dehydrogenase alpha subunit @ selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (524 aa)    
Predicted Functional Partners:
SFV74139.1
NADH ubiquinone oxidoreductase 20 kDa subunit.
  
 
 0.962
SFV74140.1
Ni,Fe-hydrogenase III large subunit.
  
 
 0.961
SFV72697.1
Heterodisulfide reductase, cytochrome reductase subunit.
  
  
 0.856
SFV72602.1
Formate dehydrogenase-O, major subunit.
 
 
 0.855
nifJ
Pyruvate-flavodoxin oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 
 0.838
SFV73568.1
Formate dehydrogenase-O, major subunit.
 
 
 0.833
cooF
CO dehydrogenase iron-sulfur protein CooF.
 
 
 0.802
SFV73426.1
Pyruvate formate-lyase activating enzyme.
   
 
 0.766
SFV73347.1
Ferredoxin.
   
 
 0.746
SFV74069.1
Carbon monoxide-induced hydrogenase small subunit CooL.
  
 
 0.746
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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