STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72703.1Type I secretion system ATPase, LssB family LapB. (767 aa)    
Predicted Functional Partners:
SFV72702.1
Type I secretion system, membrane fusion protein LapC.
 
 0.982
SFV72208.1
HlyD family secretion protein.
 
 0.911
SFV72704.1
Agglutination protein.
 
  
 0.902
pstB
Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1); Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.897
SFV72705.1
Conserved hypothetical protein.
 
  
 0.857
SFV72826.1
Alkaline phosphatase.
 
  
 0.843
SFV72701.1
HD domain/sensory box protein.
 
   
 0.764
SFV73219.1
Predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG.
  
 
 0.500
SFV73978.1
Multidrug resistance efflux pump-like.
  
 
 0.500
SFV72206.1
Outer membrane efflux protein.
  
  
 0.447
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.