Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFV72751.1Additional component NikL of nickel ECF transporter. (218 aa)    
Predicted Functional Partners:
SFV72981.1
Additional periplasmic component NikK of nickel ECF transporter.
 
  
  0.978
SFV72752.1
Substrate-specific component NikM of nickel ECF transporter.
 
    0.960
cbiQ
Transmembrane component NikQ of energizing module of nickel ECF transporter.
 
     0.955
SFV72749.1
ATPase component NikO of energizing module of nickel ECF transporter.
 
     0.951
SFV72753.1
Additional periplasmic component NikK of nickel ECF transporter.
 
     0.912
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.