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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72909.1Tryptophan-specific transport protein. (408 aa)    
Predicted Functional Partners:
SFV72908.1
Sodium-dependent transporter.
  
 
 0.805
SFV72910.1
Endoribonuclease L-PSP.
  
    0.707
SFV73163.1
Protein ygiW precursor.
  
     0.698
stp
Serine transporter.
  
   
 0.695
SFV72899.1
Spermidine export protein MdtJ.
  
     0.536
SFV73162.1
Conserved hypothetical protein 156.
  
     0.526
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
  0.519
SFV72672.1
Endonuclease I precursor.
  
     0.494
SFV72907.1
ABC transporter, ATP-binding protein.
     
 0.485
SFV72911.1
Putative phosphoesterase.
   
   0.462
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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