SFV72915.1 protein (Desulfovibrio piger) - STRING interaction network

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Score

SFV72915.1

tRNA-t(6)A37 methylthiotransferase. (448 aa)

Predicted Functional Partners:

rlmN

0.609

SFV72914.1

0.560

SFV73852.1

0.537

pnp

0.440

nifU

0.432

Your Current Organism:

Desulfovibrio piger

NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFV72914.1	SFV72915.1	DESPIGER_1051	DESPIGER_1052	FIG00604374: hypothetical protein.	tRNA-t(6)A37 methylthiotransferase.	0.560
SFV72915.1	SFV72914.1	DESPIGER_1052	DESPIGER_1051	tRNA-t(6)A37 methylthiotransferase.	FIG00604374: hypothetical protein.	0.560
SFV72915.1	SFV73852.1	DESPIGER_1052	DESPIGER_2028	tRNA-t(6)A37 methylthiotransferase.	Coproporphyrinogen III oxidase, oxygen-independent, divergent, putative; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.	0.537
SFV72915.1	nifU	DESPIGER_1052	DESPIGER_1021	tRNA-t(6)A37 methylthiotransferase.	Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	0.432
SFV72915.1	pnp	DESPIGER_1052	DESPIGER_1730	tRNA-t(6)A37 methylthiotransferase.	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.440
SFV72915.1	rlmN	DESPIGER_1052	DESPIGER_2161	tRNA-t(6)A37 methylthiotransferase.	Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.	0.609
SFV73852.1	SFV72915.1	DESPIGER_2028	DESPIGER_1052	Coproporphyrinogen III oxidase, oxygen-independent, divergent, putative; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.	tRNA-t(6)A37 methylthiotransferase.	0.537
SFV73852.1	nifU	DESPIGER_2028	DESPIGER_1021	Coproporphyrinogen III oxidase, oxygen-independent, divergent, putative; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.	Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	0.400
SFV73852.1	pnp	DESPIGER_2028	DESPIGER_1730	Coproporphyrinogen III oxidase, oxygen-independent, divergent, putative; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.458
SFV73852.1	rlmN	DESPIGER_2028	DESPIGER_2161	Coproporphyrinogen III oxidase, oxygen-independent, divergent, putative; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.	Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.	0.600
nifU	SFV72915.1	DESPIGER_1021	DESPIGER_1052	Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	tRNA-t(6)A37 methylthiotransferase.	0.432
nifU	SFV73852.1	DESPIGER_1021	DESPIGER_2028	Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	Coproporphyrinogen III oxidase, oxygen-independent, divergent, putative; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.	0.400
pnp	SFV72915.1	DESPIGER_1730	DESPIGER_1052	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	tRNA-t(6)A37 methylthiotransferase.	0.440
pnp	SFV73852.1	DESPIGER_1730	DESPIGER_2028	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	Coproporphyrinogen III oxidase, oxygen-independent, divergent, putative; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.	0.458
pnp	rlmN	DESPIGER_1730	DESPIGER_2161	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.	0.413
rlmN	SFV72915.1	DESPIGER_2161	DESPIGER_1052	Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.	tRNA-t(6)A37 methylthiotransferase.	0.609
rlmN	SFV73852.1	DESPIGER_2161	DESPIGER_2028	Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.	Coproporphyrinogen III oxidase, oxygen-independent, divergent, putative; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.	0.600
rlmN	pnp	DESPIGER_2161	DESPIGER_1730	Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.413