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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72963.1Sulfite reduction-associated complex DsrMKJOP protein DsrM (= HmeC). (307 aa)    
Predicted Functional Partners:
SFV72964.1
Sulfite reduction-associated complex DsrMKJOP protein DsrK (=HmeD).
 
 
 0.948
SFV73988.1
Sulfite reduction-associated complex DsrMKJOP protein DsrK (=HmeD).
 
 
 0.679
SFV72561.1
Hypothetical protein.
  
     0.619
SFV73765.1
Dissimilatory sulfite reductase, alpha subunit.
 
   
 0.600
dsvC
tRNA 2-thiouridine synthesizing protein E @ Sulfite reductase, dissimilatory-type gamma subunit.
 
   
 0.598
SFV73760.1
Dissimilatory sulfite reductase, alpha subunit.
 
   
 0.598
SFV72962.1
Hypothetical protein.
       0.569
dsrB
Dissimilatory sulfite reductase, beta subunit.
 
   
 0.557
SFV73764.1
Dissimilatory sulfite reductase, beta subunit.
 
   
 0.557
SFV74189.1
Related to efflux pump antibiotic resistance protein.
  
  
 0.523
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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