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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV72965.1Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family. (471 aa)    
Predicted Functional Partners:
SFV73264.1
GDP-mannose 4,6-dehydratase.
 
 
 0.958
pgi
Glucose-6-phosphate isomerase.
  
 
 0.944
fbp
Fructose-1,6-bisphosphatase, type I; Belongs to the FBPase class 1 family.
   
 0.943
SFV73209.1
Phosphomannomutase.
 
 0.931
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily.
    
 0.920
SFV72186.1
PTS system, mannose-specific IIA component.
    
 0.916
glmS
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing].
    
 0.916
glpX
Fructose-1,6-bisphosphatase, GlpX type.
     
 0.910
SFV72188.1
Membrane protein, putative.
     
  0.900
wbaP
Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.848
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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