close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV73048.1FIG00602828: hypothetical protein. (254 aa)    
Predicted Functional Partners:
SFV73049.1
Hypothetical protein.
       0.773
SFV73053.1
Translation initiation factor 2.
 
     0.585
cvpA
Colicin V production family protein.
       0.561
SFV73052.1
Trehalose synthase.
 
    0.522
SFV73051.1
Nucleoside triphosphate pyrophosphohydrolase MazG.
       0.515
SFV72476.1
FIG00602432: hypothetical protein.
  
     0.482
SFV73945.1
Lipoprotein, putative.
  
     0.478
SFV72578.1
Light-harvesting LHII, alpha subunit B / Histone protein.
  
    0.477
SFV73496.1
Chorismate mutase I / EPT-like Enolpyruvate transferase (EPSP synthase-like).
  
     0.440
SFV73047.1
Nickel responsive regulator NikR; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.
  
    0.439
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.