STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV73080.1Hypothetical protein. (95 aa)    
Predicted Functional Partners:
SFV73077.1
Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock).
       0.574
SFV73078.1
HAD-superfamily hydrolase, subfamily IA, variant 1.
       0.574
SFV73079.1
FIG00604852: hypothetical protein.
       0.574
pdxS
Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.
       0.565
SFV73082.1
Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit.
       0.565
SFV73076.1
FIG00602384: hypothetical protein.
       0.453
ilvB
Acetolactate synthase large subunit.
       0.419
ilvN
Acetolactate synthase small subunit.
       0.412
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.