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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV73086.1Na+/H+ antiporter family protein. (466 aa)    
Predicted Functional Partners:
SFV73087.1
Hypothetical protein.
       0.651
SFV73085.1
Pyridoxal phosphate-dependent deaminase, putative.
 
     0.611
SFV72732.1
Na+/H+ antiporter NhaC.
  
     0.524
SFV73084.1
Bona fide RidA/YjgF/TdcF/RutC subgroup.
  
    0.452
SFV73247.1
Protein of unknown function DUF88.
  
     0.423
SFV73088.1
Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit.
       0.402
SFV73089.1
Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit.
       0.402
SFV73053.1
Translation initiation factor 2.
  
     0.401
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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