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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV73098.1Octanoate-[acyl-carrier-protein]-protein-N- octanoyltransferase. (219 aa)    
Predicted Functional Partners:
SFV73097.1
Lipoate synthase.
 
 0.999
SFV74097.1
Lipoate-protein ligase A.
   
 0.932
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
   
 0.888
fabF
3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
    
 0.816
SFV74223.1
3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.816
SFV72001.1
Enoyl-[acyl-carrier-protein] reductase [NADH].
     
  0.800
SFV72782.1
Capsular polysaccharide biosynthesis fatty acid synthase WcbR.
  
 0.537
SFV73976.1
FIG00604257: hypothetical protein.
   
 0.508
SFV73938.1
NADH dehydrogenase.
  
   0.490
SFV74193.1
2-acylglycerophosphoethanolamine acyltransferase.
  
 0.467
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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