STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV73114.1TRAP-type C4-dicarboxylate transport system, large permease component. (442 aa)    
Predicted Functional Partners:
SFV73116.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.991
SFV73115.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
  
 0.958
eutB
Ethanolamine ammonia-lyase heavy chain.
       0.713
eutC
Ethanolamine ammonia-lyase light chain; Belongs to the EutC family.
       0.712
SFV72730.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
     0.432
SFV73643.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
     0.400
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.