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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV73163.1Protein ygiW precursor. (129 aa)    
Predicted Functional Partners:
SFV72805.1
Putative pertactin family virulence factor/autotransporter precursor.
  
    0.722
SFV73585.1
Pertactin precursor.
  
    0.716
SFV72909.1
Tryptophan-specific transport protein.
  
     0.698
stp
Serine transporter.
  
     0.686
SFV72046.1
Periplasmic phosphoanhydride phosphohydrolase.
  
     0.667
SFV73162.1
Conserved hypothetical protein 156.
 
    
0.645
SFV72672.1
Endonuclease I precursor.
  
     0.632
SFV74047.1
Putative membrane protein.
  
  
 0.610
speG
Spermidine N1-acetyltransferase.
  
     0.566
SFV72681.1
SrfB.
  
     0.535
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.