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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV73219.1Predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG. (325 aa)    
Predicted Functional Partners:
SFV73218.1
ABC transporter multidrug efflux pump, fused ATP-binding domains.
 
  
 0.960
SFV73216.1
ABC transport system, permease component YbhR.
 
  
 0.889
SFV73217.1
ABC transport system, permease component YbhS.
 
  
 0.889
SFV73434.1
RND efflux system, outer membrane lipoprotein CmeC.
 
 
 0.686
SFV72206.1
Outer membrane efflux protein.
 
 
 0.649
SFV72713.1
FIG00606106: hypothetical protein.
 
  
 0.637
SFV73300.1
Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA.
 
 
 0.626
SFV73220.1
Hypothetical protein.
       0.572
SFV72704.1
Agglutination protein.
  
 
 0.549
SFV72703.1
Type I secretion system ATPase, LssB family LapB.
  
 
 0.500
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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