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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV73270.1Probable low-affinity inorganic phosphate transporter. (758 aa)    
Predicted Functional Partners:
SFV74134.1
Phosphate transport regulator (distant homolog of PhoU).
  
  
 0.766
nifU
Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
     
 0.713
SFV72538.1
Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog.
 
     0.550
pap
Hypothetical protein.
  
  
 0.544
nifJ
Pyruvate-flavodoxin oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
     
 0.527
cvpA
Colicin V production family protein.
 
 
   0.491
SFV72241.1
Glutamate synthase [NADPH] large chain.
  
  
 0.481
SFV73268.1
Glycosyltransferase.
     
 0.475
cobA
Uroporphyrinogen-III methyltransferase / Uroporphyrinogen-III synthase.
  
  
 0.474
SFV73355.1
Membrane-bound lytic murein transglycosylase D precursor.
 
   0.471
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
Server load: low (26%) [HD]
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