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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV73308.1Biopolymer transport protein ExbD/TolR. (151 aa)    
Predicted Functional Partners:
tolQ
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.996
tolA
TolA protein.
  
 
 0.985
SFV73310.1
Putative TolA protein.
  
 
 0.887
SFV73311.1
Putative Tol-Pal system beta propeller repeat protein TolB; tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins.
 
  
 0.841
pal
18K peptidoglycan-associated outer membrane lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.818
SFV73245.1
Outer membrane autotransporter barrel domain protein.
  
 
 0.797
SFV73922.1
Outer membrane autotransporter barrel domain protein.
  
 
 0.797
yaeT
Outer membrane protein assembly factor YaeT precursor.
  
     0.739
SFV74340.1
Lipoprotein releasing system transmembrane protein LolE.
 
    0.704
yfiO
Putative lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
  
 0.626
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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