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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV73346.1Dehydrogenase, FMN-dependent family. (340 aa)    
Predicted Functional Partners:
SFV73518.1
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.792
SFV74109.1
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.771
SFV73818.1
Oxidoreductase, FAD/iron-sulfur cluster-binding domain protein.
  
 0.711
SFV73345.1
Hypothetical protein.
       0.571
SFV72782.1
Capsular polysaccharide biosynthesis fatty acid synthase WcbR.
  
 
 0.554
SFV74105.1
Glycolate dehydrogenase, subunit GlcD.
  
 0.521
SFV73347.1
Ferredoxin.
  
    0.508
SFV74193.1
2-acylglycerophosphoethanolamine acyltransferase.
  
  
 0.486
SFV72441.1
2,4-dienoyl-CoA reductase [NADPH].
   
  
 0.474
nifJ
Pyruvate-flavodoxin oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
  
 0.453
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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