Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFV73360.1Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). (539 aa)    
Predicted Functional Partners:
SFV72817.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
 
 0.958
SFV72847.1
Multi-sensor hybrid histidine kinase.
  
 
 0.933
SFV73908.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
 
 0.914
SFV72128.1
FOG: GGDEF domain.
 
 
0.879
SFV73706.1
Multi-sensor hybrid histidine kinase.
 
 
 0.834
SFV74354.1
Sensor histidine kinase/response regulator.
   
 
 0.722
SFV72701.1
HD domain/sensory box protein.
  
   
 0.704
SFV72706.1
Hypothetical membrane associated protein.
  
   
 0.680
SFV72985.1
Hypothetical protein.
 
 
0.607
SFV73605.1
Putative Fe-S oxidoreductase.
  
 
 0.582
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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