STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV73414.1Flagellar synthesis regulator FleN. (270 aa)    
Predicted Functional Partners:
SFV72390.1
Flagellar motor switch protein FliG.
 
  
 0.891
SFV74162.1
Hypothetical protein.
 
  
 0.792
SFV72277.1
Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components).
 
 
 0.720
SFV72302.1
Flagellum-specific ATP synthase FliI.
 
  
 0.616
SFV73415.1
Hypothetical protein.
       0.567
SFV72280.1
Flagellar biosynthesis protein FlhA.
  
     0.473
SFV73315.1
Nitrogen regulation protein NtrX.
  
 
 0.470
SFV73490.1
Response regulator of zinc sigma-54-dependent two-component system.
  
 
 0.470
SFV73707.1
Sigma-54 dependent DNA-binding response regulator.
  
 
 0.470
SFV74212.1
Nitrogen assimilation regulatory protein.
  
 
 0.470
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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