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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV73491.1Metal dependent phosphohydrolase. (267 aa)    
Predicted Functional Partners:
SFV72483.1
DNA topoisomerase IV subunit A.
  
     0.699
atpF-2
ATP synthase B' chain; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.525
SFV73489.1
Sensor protein of zinc sigma-54-dependent two-component system.
       0.515
SFV73490.1
Response regulator of zinc sigma-54-dependent two-component system.
       0.515
SFV72103.1
FIG00603565: hypothetical protein.
  
     0.492
SFV74077.1
FIG00607242: hypothetical protein.
  
     0.422
SFV73602.1
FIG00602706: hypothetical protein.
  
   
 0.416
purQ
Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit.
  
     0.411
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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