| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFV73547.1 | infB | DESPIGER_1711 | DESPIGER_1712 | COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination. | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.944 |
| SFV73547.1 | nusA | DESPIGER_1711 | DESPIGER_1710 | COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination. | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | 0.917 |
| SFV73547.1 | rimP | DESPIGER_1711 | DESPIGER_1709 | COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination. | FIG000325: clustered with transcription termination protein NusA; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.870 |
| SFV73547.1 | rpsL | DESPIGER_1711 | DESPIGER_2136 | COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination. | SSU ribosomal protein S12p (S23e); Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.545 |
| infB | SFV73547.1 | DESPIGER_1712 | DESPIGER_1711 | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination. | 0.944 |
| infB | nusA | DESPIGER_1712 | DESPIGER_1710 | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | 0.984 |
| infB | rimP | DESPIGER_1712 | DESPIGER_1709 | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | FIG000325: clustered with transcription termination protein NusA; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.797 |
| infB | rpsB | DESPIGER_1712 | DESPIGER_2223 | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | SSU ribosomal protein S2p (SAe); Belongs to the universal ribosomal protein uS2 family. | 0.921 |
| infB | rpsF | DESPIGER_1712 | DESPIGER_1524 | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA. | 0.835 |
| infB | rpsG | DESPIGER_1712 | DESPIGER_2135 | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | SSU ribosomal protein S7p (S5e); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.897 |
| infB | rpsJ | DESPIGER_1712 | DESPIGER_2541 | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | SSU ribosomal protein S10p (S20e); Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.862 |
| infB | rpsL | DESPIGER_1712 | DESPIGER_2136 | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | SSU ribosomal protein S12p (S23e); Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.798 |
| infB | rpsP | DESPIGER_1712 | DESPIGER_2611 | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family. | 0.815 |
| nusA | SFV73547.1 | DESPIGER_1710 | DESPIGER_1711 | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination. | 0.917 |
| nusA | infB | DESPIGER_1710 | DESPIGER_1712 | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.984 |
| nusA | rimM | DESPIGER_1710 | DESPIGER_2613 | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | 0.757 |
| nusA | rimP | DESPIGER_1710 | DESPIGER_1709 | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | FIG000325: clustered with transcription termination protein NusA; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.926 |
| nusA | rpsB | DESPIGER_1710 | DESPIGER_2223 | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | SSU ribosomal protein S2p (SAe); Belongs to the universal ribosomal protein uS2 family. | 0.937 |
| nusA | rpsF | DESPIGER_1710 | DESPIGER_1524 | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA. | 0.883 |
| nusA | rpsG | DESPIGER_1710 | DESPIGER_2135 | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | SSU ribosomal protein S7p (S5e); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.952 |
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