Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFV72205.1 | SFV72782.1 | DESPIGER_0313 | DESPIGER_0919 | Predicted hydrolase (HAD superfamily). | Capsular polysaccharide biosynthesis fatty acid synthase WcbR. | 0.658 |
SFV72205.1 | SFV73709.1 | DESPIGER_0313 | DESPIGER_1880 | Predicted hydrolase (HAD superfamily). | Glycosyl transferase, group 2 family protein. | 0.562 |
SFV72205.1 | SFV73710.1 | DESPIGER_0313 | DESPIGER_1881 | Predicted hydrolase (HAD superfamily). | DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.520 |
SFV72205.1 | SFV73718.1 | DESPIGER_0313 | DESPIGER_1889 | Predicted hydrolase (HAD superfamily). | FIG071646: Sugar transferase. | 0.585 |
SFV72205.1 | wbaP | DESPIGER_0313 | DESPIGER_2516 | Predicted hydrolase (HAD superfamily). | Undecaprenyl-phosphate galactosephosphotransferase. | 0.585 |
SFV72782.1 | SFV72205.1 | DESPIGER_0919 | DESPIGER_0313 | Capsular polysaccharide biosynthesis fatty acid synthase WcbR. | Predicted hydrolase (HAD superfamily). | 0.658 |
SFV72782.1 | SFV73709.1 | DESPIGER_0919 | DESPIGER_1880 | Capsular polysaccharide biosynthesis fatty acid synthase WcbR. | Glycosyl transferase, group 2 family protein. | 0.515 |
SFV72782.1 | SFV73710.1 | DESPIGER_0919 | DESPIGER_1881 | Capsular polysaccharide biosynthesis fatty acid synthase WcbR. | DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.523 |
SFV73709.1 | SFV72205.1 | DESPIGER_1880 | DESPIGER_0313 | Glycosyl transferase, group 2 family protein. | Predicted hydrolase (HAD superfamily). | 0.562 |
SFV73709.1 | SFV72782.1 | DESPIGER_1880 | DESPIGER_0919 | Glycosyl transferase, group 2 family protein. | Capsular polysaccharide biosynthesis fatty acid synthase WcbR. | 0.515 |
SFV73709.1 | SFV73710.1 | DESPIGER_1880 | DESPIGER_1881 | Glycosyl transferase, group 2 family protein. | DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.689 |
SFV73709.1 | SFV73711.1 | DESPIGER_1880 | DESPIGER_1882 | Glycosyl transferase, group 2 family protein. | Permease of the drug/metabolite transporter (DMT) superfamily. | 0.411 |
SFV73709.1 | SFV73718.1 | DESPIGER_1880 | DESPIGER_1889 | Glycosyl transferase, group 2 family protein. | FIG071646: Sugar transferase. | 0.677 |
SFV73709.1 | wbaP | DESPIGER_1880 | DESPIGER_2516 | Glycosyl transferase, group 2 family protein. | Undecaprenyl-phosphate galactosephosphotransferase. | 0.600 |
SFV73710.1 | SFV72205.1 | DESPIGER_1881 | DESPIGER_0313 | DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | Predicted hydrolase (HAD superfamily). | 0.520 |
SFV73710.1 | SFV72782.1 | DESPIGER_1881 | DESPIGER_0919 | DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | Capsular polysaccharide biosynthesis fatty acid synthase WcbR. | 0.523 |
SFV73710.1 | SFV73709.1 | DESPIGER_1881 | DESPIGER_1880 | DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | Glycosyl transferase, group 2 family protein. | 0.689 |
SFV73710.1 | SFV73711.1 | DESPIGER_1881 | DESPIGER_1882 | DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | Permease of the drug/metabolite transporter (DMT) superfamily. | 0.520 |
SFV73710.1 | SFV73718.1 | DESPIGER_1881 | DESPIGER_1889 | DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | FIG071646: Sugar transferase. | 0.633 |
SFV73710.1 | wbaP | DESPIGER_1881 | DESPIGER_2516 | DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | Undecaprenyl-phosphate galactosephosphotransferase. | 0.566 |
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