STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV73797.1Predicted cobalt transporter in sulfate-reducing delta-proteobacteria. (328 aa)    
Predicted Functional Partners:
SFV73819.1
Membrane protein, putative.
  
     0.767
SFV72414.1
FIG00602688: hypothetical protein.
  
     0.762
SFV73139.1
Molybdenum cofactor biosynthesis protein MoaE.
  
     0.743
rnhA
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.743
SFV73041.1
FIG00605059: hypothetical protein.
  
     0.738
SFV72461.1
TPR domain protein.
  
    0.701
SFV73998.1
FIG00603463: hypothetical protein.
  
     0.689
SFV71981.1
Vitamin B12 ABC transporter, B12-binding component BtuF.
 
    0.653
SFV73369.1
FIG00605289: hypothetical protein.
  
     0.646
SFV74138.1
Metal dependent phosphohydrolase.
  
    0.590
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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