rplU protein (Desulfovibrio piger) - STRING interaction network

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Score

rplU

LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (102 aa)

Predicted Functional Partners:

rpmA

0.989

rpsI

0.984

rplX

0.983

rplT

0.982

rplS

0.982

rpsJ

0.981

rplM

0.980

rpmB

0.980

rpsP

0.980

rpsT

0.979

Your Current Organism:

Desulfovibrio piger

NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplS	DESPIGER_0110	DESPIGER_2623	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.980
rplM	rplT	DESPIGER_0110	DESPIGER_2350	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.986
rplM	rplU	DESPIGER_0110	DESPIGER_2050	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.980
rplM	rplX	DESPIGER_0110	DESPIGER_2553	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L24p (L26e); One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.987
rplM	rpmA	DESPIGER_0110	DESPIGER_2052	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L27p.	0.984
rplM	rpmB	DESPIGER_0110	DESPIGER_0297	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.	0.977
rplM	rpsI	DESPIGER_0110	DESPIGER_0111	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S9p (S16e); Belongs to the universal ribosomal protein uS9 family.	0.996
rplM	rpsJ	DESPIGER_0110	DESPIGER_2541	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S10p (S20e); Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.980
rplM	rpsP	DESPIGER_0110	DESPIGER_2611	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.	0.980
rplM	rpsT	DESPIGER_0110	DESPIGER_0345	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S20p; Binds directly to 16S ribosomal RNA.	0.979
rplS	rplM	DESPIGER_2623	DESPIGER_0110	LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.980
rplS	rplT	DESPIGER_2623	DESPIGER_2350	LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.980
rplS	rplU	DESPIGER_2623	DESPIGER_2050	LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.982
rplS	rplX	DESPIGER_2623	DESPIGER_2553	LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	LSU ribosomal protein L24p (L26e); One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.959
rplS	rpmA	DESPIGER_2623	DESPIGER_2052	LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	LSU ribosomal protein L27p.	0.982
rplS	rpmB	DESPIGER_2623	DESPIGER_0297	LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.	0.979
rplS	rpsI	DESPIGER_2623	DESPIGER_0111	LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	SSU ribosomal protein S9p (S16e); Belongs to the universal ribosomal protein uS9 family.	0.977
rplS	rpsJ	DESPIGER_2623	DESPIGER_2541	LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	SSU ribosomal protein S10p (S20e); Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.978
rplS	rpsP	DESPIGER_2623	DESPIGER_2611	LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.	0.990
rplS	rpsT	DESPIGER_2623	DESPIGER_0345	LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	SSU ribosomal protein S20p; Binds directly to 16S ribosomal RNA.	0.953