STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV73962.1Cytochrome d ubiquinol oxidase subunit I. (437 aa)    
Predicted Functional Partners:
cydB
Cytochrome d ubiquinol oxidase subunit II.
 
 0.999
glpA
Anaerobic glycerol-3-phosphate dehydrogenase subunit A.
     
 0.553
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
       0.529
SFV72167.1
L-aspartate oxidase.
     
 0.527
SFV72557.1
Anaerobic glycerol-3-phosphate dehydrogenase subunit A.
     
 0.510
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
   
  
 0.408
SFV72847.1
Multi-sensor hybrid histidine kinase.
     
 0.403
SFV73964.1
Transcriptional regulator, AsnC family.
       0.403
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.