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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV73979.1Polysaccharide biosynthesis protein. (473 aa)    
Predicted Functional Partners:
SFV73976.1
FIG00604257: hypothetical protein.
  
    0.825
SFV73977.1
Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA.
       0.779
SFV73978.1
Multidrug resistance efflux pump-like.
       0.776
SFV73980.1
Iron-sulfur cluster-binding protein.
       0.773
SFV73981.1
Hypothetical protein.
       0.773
SFV72548.1
UDP-glucose dehydrogenase.
  
  
 0.755
SFV72215.1
dTDP-glucose 4,6-dehydratase.
  
  
 0.753
SFV72216.1
Glucose-1-phosphate thymidylyltransferase.
  
  
 0.746
SFV72792.1
UDP-galactopyranose mutase.
  
  
 0.746
SFV72217.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
  
  
 0.644
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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