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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV74070.1Carbon monoxide-induced hydrogenase proton translocating subunit CooK. (320 aa)    
Predicted Functional Partners:
SFV74139.1
NADH ubiquinone oxidoreductase 20 kDa subunit.
 
 
 0.996
SFV74140.1
Ni,Fe-hydrogenase III large subunit.
 
 
 0.990
SFV74069.1
Carbon monoxide-induced hydrogenase small subunit CooL.
 
 
 0.988
SFV74071.1
Carbon monoxide-induced hydrogenase membrane protein CooM.
 
 
 0.981
SFV74065.1
Carbon monoxide-induced hydrogenase large subunit CooH.
 
 
 0.979
SFV74067.1
Carbon monoxide-induced hydrogenase iron-sulfur protein CooX.
 
 
 0.979
SFV74066.1
Carbon monoxide-induced hydrogenase NuoC-like protein CooU.
 
 
 0.930
SFV74141.1
Hydrogenase-4 component F.
 
 
 0.873
SFV74144.1
Hydrogenase-4 component B / Formate hydrogenlyase subunit 3.
 
 
 0.868
cooF
CO dehydrogenase iron-sulfur protein CooF.
  
 
 0.809
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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