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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV74095.1Hypothetical protein. (208 aa)    
Predicted Functional Partners:
SFV74094.1
RND multidrug efflux transporter; Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.773
SFV73894.1
Methylated-DNA--protein-cysteine methyltransferase.
  
   
 0.714
SFV74014.1
FIG00604693: hypothetical protein.
  
     0.707
SFV74015.1
Membrane protein, putative.
  
     0.687
SFV72414.1
FIG00602688: hypothetical protein.
  
     0.648
SFV72437.1
Phosphoenolpyruvate synthase.
  
    0.633
dsvD
Dissimilatory sulfite reductase clustered protein DsrD.
  
     0.611
ribA
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
   0.607
dsvD-2
Dissimilatory sulfite reductase clustered protein DsrD.
  
     0.603
SFV72118.1
Hypothetical protein.
  
     0.577
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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